
Submitted by rd758 on Thu, 27/11/2025 - 10:02
The Cambridge iGEM team won a Gold Medal at the 2025 iGEM Grand Jamboree. Their project ‘CamiRa’ aimed to develop a cheap, fast and accessible tool for on-farm crop diagnosis.
The International Genetically Engineered Machine (iGEM) is the world’s largest synthetic biology competition, in which university students work in labs over the summer to solve real-world problems by repurposing or engineering biological systems. In 2025 alone, thousands of students from over 400 universities worldwide presented their work at the Grand Jamboree in Paris.
Meet the Team
This year’s iGem team was interdisciplinary and international, comprising nine Cambridge undergraduates: Kim Anjarwalla (1st year Natural Sciences), Molly Dorricott (1st year Natural Sciences), Alexander Gillan (1st year Natural Sciences), Amitan Joseph (1st year Engineering), Kelda Lee (1st year Natural Sciences), Cassandra Lui (1st year Natural Sciences), Darren Sim (1st year Natural Sciences), Steven Sun (1st year Natural Sciences), and Paul Vongtanakiat (1st year Natural Sciences).
The 2025 Cambridge iGem Team outside Churchill College. From left to right: Molly Dorricott, Amitan Joseph, Alexander Gillan, Kelda Lee, Darren Sim, Steven Sun, Kim Anjarwalla, Paul Vongtanakiat and Cassandra Lui.
CamiRa (Crop assessment by miRNA analysis)
Current crop diagnostic methods rely on visual or lab analysis; the former can be inaccurate and occurs too late, since the plant has already shown a phenotype, while the latter is expensive and not accessible to many small-scale farmers in poorer countries and remote locations. What if someone could detect stress in a plant caused by nutrient deficiencies or pathogen infection before the plant shows any symptoms, in a cheap, fast, and accessible way?
The 2025 Cambridge iGem team aimed to tackle this question by developing CamiRa (Crop assessment by miRNA analysis). Because specific miRNAs are upregulated in plants during stress responses (e.g., miR-399 is upregulated when a plant lacks phosphate) before the appearance of a phenotype, the team leveraged this to develop their diagnostic system.
The diagnostic system consists of a paper disc with components for Rolling Circle Amplification (RCA) and a circular DNA ssDNA probe containing the complementary sequence to the miRNA. RCA uses the target miRNA as the primer to replicate the DNA sequence on the circular probe, creating a long stretch of DNA (Figure 1).
Figure 1: Rolling circle amplification (RCA) can be initiated by miRNA binding to a circular ssDNA probe, acting as a primer for the DNA polymerase.
The extended DNA was designed to include a guanine-rich sequence that forms a non-canonical secondary structure called a G-quadruplex, which was then detected with the fluorescent dye Thioflavin T using a black box and an app the team developed (Figure 2).
Figure 2: Fluorescence caused by Thioflavin T bound to G-quadruplex structures formed from an extended rolling circle amplification (RCA) product.
Given that farmers do not own standard lab equipment, such as pipettes or ultracentrifuges, and to avoid the use of hazardous chemicals, the team developed a safe, easy-to-use method for miRNA extraction from plant tissue. The method is an adaptation of the isopropanol RNA extraction method, designed to be accessible to farmers. The extraction kit includes a hand centrifuge, pestle, and a ‘Syringe Pipette’ and can extract miRNA from plant leaves (Figure 3).
Figure 3: The hand centrifuge, pestle, and the ‘Syringe Pipette’ designed for the safe and accessible RNA extraction method.
In summary, the team developed a proof-of-concept method for on-farm crop diagnosis that is cheap, fast, and easy to use.
Email igem.cambridge@gmail.com if you would be interested in sponsoring future Cambridge iGEM teams. |
Credits and Acknowledgements
The team wishes to express gratitude to all the academics who have offered their support throughout the project: Professor Nicola Patron, Professor Yi Xiao, Professor Catherine Merrick, Professor Anton Enright, Professor Katherine Stott, Professor Bill Broadhurst, Dr David Burden, Dr Julian Huppert and Dr Ying Liu.
Furthermore, the team is very grateful to the Departments of Biochemistry and Chemistry for providing laboratory space over the summer. Additionally, the team wishes to thank the laboratory technicians at the Department of Biochemistry—Rachel Hammond, Nina Ruff, and especially Dr Siolian Ball—for their support throughout the summer.
The team also sincerely thanks university-affiliated organisations and industry sponsors for their generous support, which has been crucial to the project's success: School of Biological Sciences, Department of Engineering, Student-led Projects and Industry Partnership (SPIP), Engineering Biology Interdisciplinary Research Centre (EngBio IRC), as well as the companies Constructive.bio, BMG Labtech, Twist Bioscience and CamBio.
Finally, the team wishes to express their appreciation to the instructors and advisors who supervised and helped them throughout the project: Dr Jarrod Shilts, Kavi Shah, Anqi Yu, Weizhuo Chen, Cenyujia Wang, Honghao Su and Gabriele Cannucciari.
Related Links
- The 2025 Cambridge iGem team’s wiki, documenting their work over the summer
- The team’s project promotion video for a lay audience
- The presentation video, summarising the project background and results
- Alexander’s and Amitan’s live-stage talk “Modelling the 3D Co-Transcriptional Folding of G-Quadruplexes”
- iGem’s 2025 website
Author Information
Gabriele Cannucciari, PhD student in the Willis Group (Department of Chemistry) (gc704@cam.ac.uk)